Pseudomonas aeruginosa PAO1, PA0627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0627
Name
Replicon chromosome
Genomic location 686693 - 686899 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_249318.1
GI 15595824
Affymetrix PA0627_at
DNASU PaCD00006279
Entrez 878208
GenBank AAG04016.1
INSDC AAG04016.1
NCBI Locus Tag PA0627
protein_id(GenBank) gb|AAG04016.1|AE004498_11|gnl|PseudoCAP|PA0627
TIGR NTL03PA00628
UniParc UPI00000D4264
UniProtKB Acc G3XD62
UniProtKB ID G3XD62_PSEAE
UniRef100 UniRef100_W0YNP6
UniRef50 UniRef50_Q48KG6
UniRef90 UniRef90_W0YNP6

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -6.63
Kyte-Doolittle Hydrophobicity Value 0.071
Molecular Weight (kDa) 7.5
Isoelectric Point (pI) 4.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6U5K ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - postcontracted - baseplate Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 100.0
6U5B ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - precontracted - baseplate Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000610 (300 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0627

Human Homologs

References

Functions involved in bacteriophage P2-induced host cell lysis and identification of a new tail gene.
Ziermann R, Bartlett B, Calendar R, Christie GE
J Bacteriol 1994 Aug;176(16):4974-84
PubMed ID: 8051010