Pseudomonas aeruginosa UCBPP-PA14, PA14_05200

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_05200
Name
Replicon chromosome
Genomic location 453674 - 454573 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_788571.1
GI 116054128
Entrez 4383787
INSDC ABJ15364.1
NCBI Locus Tag PA14_05200
UniParc UPI000045D3F8
UniProtKB Acc Q02U15
UniProtKB ID Q02U15_PSEAB
UniRef100 UniRef100_S0I5G9
UniRef50 UniRef50_B4RIN0
UniRef90 UniRef90_V6A7V1

Product

Feature Type CDS
Coding Frame 1
Product Name
cation efflux system protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.63
Kyte-Doolittle Hydrophobicity Value 0.611
Molecular Weight (kDa) 32.4
Isoelectric Point (pI) 5.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6VD8 TRANSPORT PROTEIN 12/23/19 Metal-bound C-terminal domain of CzcD transporter from Pseudomonas aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.3 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000388 (818 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_05200

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
E-value: 1.6e-29
Percent Identity: 28.8
Ensembl 110, assembly GRCh38.p14
solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
E-value: 1.6e-29
Percent Identity: 28.8
Ensembl 110, assembly GRCh38.p14
solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
E-value: 1.6e-29
Percent Identity: 28.8
Ensembl 110, assembly GRCh38.p14
solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
E-value: 1.6e-29
Percent Identity: 28.8

References

No references are associated with this feature.