Pseudomonas aeruginosa UCBPP-PA14, PA14_06730 (nirC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_06730
Name
nirC
Replicon chromosome
Genomic location 587650 - 588009 (- strand)

Cross-References

RefSeq YP_788687.1
GI 116054243
Entrez 4383883
INSDC ABJ15479.1
NCBI Locus Tag PA14_06730
UniParc UPI00001301AB
UniProtKB Acc Q02TP9
UniProtKB ID Q02TP9_PSEAB
UniRef100 UniRef100_Q51479
UniRef50 UniRef50_Q51479
UniRef90 UniRef90_Q51479

Product

Feature Type CDS
Coding Frame 1
Product Name
c-type cytochrome
Synonyms
Evidence for Translation
Charge (pH 7) -1.14
Kyte-Doolittle Hydrophobicity Value -0.087
Molecular Weight (kDa) 12.8
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6TP9 ELECTRON TRANSPORT 12/12/19 c-type cytochrome NirC Pseudomonas aeruginosa PAO1 2.19 X-RAY DIFFRACTION 96.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 37 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000501 (351 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_06730
Search term: nirC
Search term: c-type cytochrome

Human Homologs

References

No references are associated with this feature.