Pseudomonas aeruginosa UCBPP-PA14, PA14_10040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_10040
Name
Replicon chromosome
Genomic location 862538 - 864247 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_788951.1
GI 116052205
EC Number 3.5.1.4
Entrez 4382178
INSDC ABJ13441.1
NCBI Locus Tag PA14_10040
UniParc UPI00003962CB
UniProtKB Acc Q02SY5
UniProtKB ID Q02SY5_PSEAB
UniRef100 UniRef100_Q02SY5
UniRef50 UniRef50_H6MQZ9
UniRef90 UniRef90_A0A077JLC2

Product

Feature Type CDS
Coding Frame 1
Product Name
amidase
Synonyms
Evidence for Translation
Charge (pH 7) -15.10
Kyte-Doolittle Hydrophobicity Value -0.139
Molecular Weight (kDa) 60.5
Isoelectric Point (pI) 4.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6YHV TOXIN 03/31/20 Structural insights into Pseudomonas aeruginosa Type six secretion system exported effector 8: unliganded Tse8 Pseudomonas aeruginosa PAO1 1.893 X-RAY DIFFRACTION 99.8
6TE4 TOXIN 11/11/19 Structural insights into Pseudomonas aeruginosa Type six secretion system exported effector 8: Tse8 in complex with a peptide Escherichia coli BL21(DE3); Pseudomonas aeruginosa PAO1 2.29 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001533 (483 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_10040
Search term: amidase

Human Homologs

References

No references are associated with this feature.