Pseudomonas aeruginosa UCBPP-PA14, PA14_45740 (fliR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_45740
Name
fliR
Replicon chromosome
Genomic location 4067897 - 4068673 (- strand)

Cross-References

RefSeq YP_791804.1
GI 116049393
Entrez 4380175
INSDC ABJ10629.1
NCBI Locus Tag PA14_45740
UniParc UPI0000396723
UniProtKB Acc Q02JT2
UniProtKB ID Q02JT2_PSEAB
UniRef100 UniRef100_W0YLV4
UniRef50 UniRef50_W0YLV4
UniRef90 UniRef90_W0YLV4

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliR
Synonyms
Evidence for Translation
Charge (pH 7) -0.32
Kyte-Doolittle Hydrophobicity Value 1.198
Molecular Weight (kDa) 27.5
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 321 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001365 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_45740
Search term: fliR

Human Homologs

References

No references are associated with this feature.