Pseudomonas aeruginosa UCBPP-PA14, PA14_49870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_49870
Name
Replicon chromosome
Genomic location 4434110 - 4434649 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_792145.1
GI 116049053
EC Number 3.5.1.88
Entrez 4380089
INSDC ABJ10289.1
NCBI Locus Tag PA14_49870
UniParc UPI00003965F5
UniProtKB Acc Q02IU1
UniProtKB ID Q02IU1_PSEAB
UniRef100 UniRef100_Q02IU1
UniRef50 UniRef50_Q8PGV2
UniRef90 UniRef90_A6V966

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -10.62
Kyte-Doolittle Hydrophobicity Value -0.263
Molecular Weight (kDa) 20.1
Isoelectric Point (pI) 4.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6JFE HYDROLASE 02/08/19 K2U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 100.0
6JF9 HYDROLASE 02/08/19 Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.7 X-RAY DIFFRACTION 100.0
6JFA HYDROLASE 02/08/19 Met-Ala-Ser bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 1.93 X-RAY DIFFRACTION 100.0
6JFD HYDROLASE 02/08/19 K1U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 100.0
6JFN HYDROLASE 02/11/19 K4U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.04 X-RAY DIFFRACTION 100.0
6JFF HYDROLASE 02/08/19 K3U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 100.0
6JFC HYDROLASE 02/08/19 Actinonin bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.04 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001082 (483 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_49870

Human Homologs

References

No references are associated with this feature.