Pseudomonas aeruginosa PAO1, PA3969

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3969
Name
Replicon chromosome
Genomic location 4447133 - 4448218 (+ strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252658.1
GI 15599164
Affymetrix PA3969_at
Entrez 878865
GenBank AAG07356.1
INSDC AAG07356.1
NCBI Locus Tag PA3969
protein_id(GenBank) gb|AAG07356.1|AE004814_11|gnl|PseudoCAP|PA3969
TIGR NTL03PA03969
UniParc UPI00000C5BA5
UniProtKB Acc Q9HX47
UniProtKB ID Q9HX47_PSEAE
UniRef100 UniRef100_Q9HX47
UniRef50 UniRef50_A6V0E1
UniRef90 UniRef90_W0YZ57

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 6.82
Kyte-Doolittle Hydrophobicity Value -0.473
Molecular Weight (kDa) 40.6
Isoelectric Point (pI) 9.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 276 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001710 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3969

Human Homologs

Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 3.4e-58
Percent Identity: 43.0

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
A set of ordered cosmids and a detailed genetic and physical map for the 8 Mb Streptomyces coelicolor A3(2) chromosome.
Redenbach M, Kieser HM, Denapaite D, Eichner A, Cullum J, Kinashi H, Hopwood DA
Mol Microbiol 1996 Jul;21(1):77-96
PubMed ID: 8843436