Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4000
|
Name |
rlpA
|
Replicon | chromosome |
Genomic location | 4480205 - 4481233 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | septal ring protein, suppressor of prc, minor lipoprotein |
RefSeq | NP_252689.1 |
GI | 15599195 |
Affymetrix | PA4000_at |
Entrez | 878957 |
GenBank | AAG07387.1 |
INSDC | AAG07387.1 |
NCBI Locus Tag | PA4000 |
protein_id(GenBank) | gb|AAG07387.1|AE004817_11|gnl|PseudoCAP|PA4000 |
TIGR | NTL03PA04000 |
UniParc | UPI000013427D |
UniProtKB Acc | Q9X6V6 |
UniProtKB ID | RLPA_PSEAE |
UniRef100 | UniRef100_Q9X6V6 |
UniRef50 | UniRef50_Q9X6V6 |
UniRef90 | UniRef90_Q9X6V6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RlpA
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 13.37 |
Kyte-Doolittle Hydrophobicity Value | -0.193 |
Molecular Weight (kDa) | 36.5 |
Isoelectric Point (pI) | 10.10 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6I09 | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan obtained by soaking | Pseudomonas aeruginosa | 1.48 | X-RAY DIFFRACTION | 100.0 |
6I0A | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with nuded glycan obtained by co-crystallization | Pseudomonas aeruginosa | 1.3 | X-RAY DIFFRACTION | 100.0 |
6I0N | CELL CYCLE | 10/26/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan ended in anhNAM | Pseudomonas aeruginosa | 1.4 | X-RAY DIFFRACTION | 100.0 |
6I05 | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.213 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 349 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001683 (530 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4000
Search term: rlpA
Search term: RlpA
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Nucleotide sequence of the rodA gene, responsible for the rod shape of Escherichia coli: rodA and the pbpA gene, encoding penicillin-binding protein 2, constitute the rodA operon.
Matsuzawa H, Asoh S, Kunai K, Muraiso K, Takasuga A, Ohta T
J Bacteriol 1989 Jan;171(1):558-60
PubMed ID: 2644207
|
Discovery and characterization of three new Escherichia coli septal ring proteins that contain a SPOR domain: DamX, DedD, and RlpA.
Arends SJ, Williams K, Scott RJ, Rolong S, Popham DL, Weiss DS
J Bacteriol 2010 Jan;192(1):242-55
PubMed ID: 19880599
|