Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4274
|
Name |
rplK
|
Replicon | chromosome |
Genomic location | 4782680 - 4783111 (- strand) |
RefSeq | NP_252964.1 |
GI | 15599470 |
Affymetrix | PA4274_rplK_at |
DNASU | PaCD00007856 |
Entrez | 881705 |
GenBank | AAG07662.1 |
INSDC | AAG07662.1 |
NCBI Locus Tag | PA4274 |
protein_id(GenBank) | gb|AAG07662.1|AE004843_4|gnl|PseudoCAP|PA4274 |
TIGR | NTL03PA04275 |
UniParc | UPI00000C5C8F |
UniProtKB Acc | Q9HWC5 |
UniProtKB ID | RL11_PSEAE |
UniRef100 | UniRef100_A6UZH7 |
UniRef50 | UniRef50_P62441 |
UniRef90 | UniRef90_Q889Y2 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L11
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (14.91 kDa, PMID:21751344)
Detected by two-dimensional gel electrophoresis, mass spectral analysis and protein mass mapping (PMID:21863142).
|
Charge (pH 7) | 7.19 |
Kyte-Doolittle Hydrophobicity Value | -0.142 |
Molecular Weight (kDa) | 14.9 |
Isoelectric Point (pI) | 10.43 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPB | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Pseudomonas aeruginosa | 2.82 | ELECTRON MICROSCOPY | 100.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPD | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001437 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4274
Search term: rplK
Search term: 50S ribosomal protein L11
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:14042]
E-value:
8.5e-21
Percent Identity:
40.4
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:14042]
E-value:
8.5e-21
Percent Identity:
40.4
|
Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli.
Post LE, Strycharz GD, Nomura M, Lewis H, Dennis PP
Proc Natl Acad Sci U S A 1979 Apr;76(4):1697-701
PubMed ID: 377281
|
Structural properties of ribosomal protein L11 from Escherichia coli.
Choli T
Biochem Int 1989 Dec;19(6):1323-38
PubMed ID: 2483975
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|