Pseudomonas aeruginosa PAO1, PA1197

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA1197
Name
Replicon chromosome
Genomic location 1298722 - 1299492 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249888.1
GI 15596394
Affymetrix PA1197_at
Entrez 879533
GenBank AAG04586.1
INSDC AAG04586.1
NCBI Locus Tag PA1197
protein_id(GenBank) gb|AAG04586.1|AE004550_2|gnl|PseudoCAP|PA1197
TIGR NTL03PA01198
UniParc UPI00000C52A0
UniProtKB Acc Q9I4E1
UniProtKB ID NPD2_PSEAE
UniRef100 UniRef100_Q9I4E1
UniRef50 UniRef50_Q9I4E1
UniRef90 UniRef90_Q9I4E1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -4.29
Kyte-Doolittle Hydrophobicity Value -0.091
Molecular Weight (kDa) 27.7
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001155 (361 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1197

Human Homologs

Ensembl 110, assembly GRCh38.p14
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value: 4.1e-26
Percent Identity: 32.9
Ensembl 110, assembly GRCh38.p14
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value: 4.1e-26
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value: 4.1e-26
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value: 4.1e-26
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value: 4.1e-26
Percent Identity: 31.9

References

The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.
Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, Richardson DL, Kerlavage AR, Graham DE, Kyrpides NC, Fleischmann RD, Quackenbush J, Lee NH, Sutton GG, Gill S, Kirkness EF, Dougherty BA, McKenney K, Adams MD, Loftus B, Peterson S, Reich CI, McNeil LK, Badger JH, Glodek A, Zhou L, Overbeek R, Gocayne JD, Weidman JF, McDonald L, Utterback T, Cotton MD, Spriggs T, Artiach P, Kaine BP, Sykes SM, Sadow PW, D'Andrea KP, Bowman C, Fujii C, Garland SA, Mason TM, Olsen GJ, Fraser CM, Smith HO, Woese CR, Venter JC
Nature 1997 Nov 27;390(6658):364-70
PubMed ID: 9389475