Pseudomonas putida F1, Pput_0004 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida F1
GCF_000016865.1|latest
Locus Tag
Pput_0004
Name
gyrB
Replicon chromosome
Genomic location 4170 - 6590 (+ strand)

Cross-References

RefSeq YP_001265365.1
GI 148545263
Entrez 5192243
INSDC ABQ76181.1
NCBI Locus Tag Pput_0004
UniParc UPI000000E982
UniProtKB Acc A5VWC1
UniProtKB ID A5VWC1_PSEP1
UniRef100 UniRef100_I7BRI4
UniRef50 UniRef50_P13364
UniRef90 UniRef90_P13364

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -14.24
Kyte-Doolittle Hydrophobicity Value -0.384
Molecular Weight (kDa) 90.0
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pput_0004
Search term: gyrB

Human Homologs

Ensembl 97, assembly GRCh38.p12
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 1.9e-33
Percent Identity: 26.1

References

No references are associated with this feature.