Pseudomonas aeruginosa UCBPP-PA14, PA14_49880

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_49880
Name
Replicon	chromosome
Genomic location	4434859 - 4435431 (+ strand)
Transposon Mutants	2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	1 transposon mutants in orthologs

Cross-References

RefSeq	YP_792146.1
GI	116049052
Entrez	4380088
INSDC	ABJ10288.1
NCBI Locus Tag	PA14_49880
UniParc	UPI0000E44B5C
UniProtKB Acc	Q02IU0
UniProtKB ID	Q02IU0_PSEAB
UniRef100	UniRef100_Q02IU0
UniRef50	UniRef50_W0YNF8
UniRef90	UniRef90_W0YNF8

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.77
Kyte-Doolittle Hydrophobicity Value	0.035
Molecular Weight (kDa)	20.6
Isoelectric Point (pI)	8.38

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
5Y61	SIGNALING PROTEIN	08/10/17	YfiB-YfiR complexed with GMP	Pseudomonas aeruginosa	2.99	X-RAY DIFFRACTION	98.1
4ZHU	TRANSCRIPTION	04/27/15	Crystal structure of a bacterial repressor protein	Pseudomonas aeruginosa PAO1	2.3968	X-RAY DIFFRACTION	98.9
6IKK	SIGNALING PROTEIN	10/16/18	Crystal structure of YfiB(L43P) in complex with YfiR	Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)	2.19	X-RAY DIFFRACTION	98.9
5Y62	SIGNALING PROTEIN	08/10/17	YfiR complexed with GMP	Pseudomonas aeruginosa	3	X-RAY DIFFRACTION	98.1
4XJY	SIGNALING PROTEIN	01/09/15	Periplasmic repressor protein YfiR	Pseudomonas aeruginosa PAO1	1.8	X-RAY DIFFRACTION	98.7
4YN7	TRANSCRIPTION	03/09/15	Non-oxidized YfiR	Pseudomonas aeruginosa PAO1	2.6	X-RAY DIFFRACTION	98.1
5EB3	TRANSCRIPTION	10/17/15	VB6-bound protein	Pseudomonas aeruginosa PAO1	2.4	X-RAY DIFFRACTION	98.1
4YNA	TRANSCRIPTION	03/09/15	Oxidized YfiR	Pseudomonas aeruginosa PAO1	3.2	X-RAY DIFFRACTION	98.1
5EB1	MEMBRANE PROTEIN/TRANSCRIPTION	10/17/15	the YfiB-YfiR complex	Pseudomonas aeruginosa PAO1	1.8	X-RAY DIFFRACTION	98.1
4ZHY	TRANSCRIPTION/SIGNALING PROTEIN	04/27/15	Crystal structure of a bacterial signalling complex	Pseudomonas aeruginosa PAO1	1.969	X-RAY DIFFRACTION	98.4
5EB2	TRANSCRIPTION	10/17/15	Trp-bound YfiR	Pseudomonas aeruginosa PAO1	2.709	X-RAY DIFFRACTION	98.1

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001081 (444 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_49880

Human Homologs

References