Pseudomonas syringae pv. tomato DC3000, PSPTO_1431

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1431
NCBI Old Locus Tag	PSPTO1431
Name	Synonym: PSPTO1431
Replicon	chromosome
Genomic location	1568618 - 1569766 (+ strand)

Cross-References

RefSeq	NP_791257.1
GI	28868638
Entrez	1183068
INSDC	AAO54952.1
NCBI Locus Tag	PSPTO_1431
NCBI Old Locus Tag	PSPTO1431
UniParc	UPI00000087DA
UniProtKB Acc	Q886Z3
UniProtKB ID	RLMN_PSESM
UniRef100	UniRef100_Q886Z3
UniRef50	UniRef50_Q8PKZ1
UniRef90	UniRef90_Q4K6U6

Product

Feature Type	CDS
Coding Frame	1
Product Name	radical SAM enzyme, Cfr family
Synonyms
Evidence for Translation
Charge (pH 7)	2.66
Kyte-Doolittle Hydrophobicity Value	-0.179
Molecular Weight (kDa)	42.2
Isoelectric Point (pI)	7.72

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 558 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001860 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1431 Search term: radical SAM enzyme, Cfr family

Human Homologs

References