Motif View

Internal ID 17656589
Source Database TransTermHP TERM 7
Feature Type terminator
Name
Rho-independent transcription terminator TERM 7
Sequence GGCCCGGTGTCGCGAGGACGCCGGGCC
Look for more occurrences
Start 10385
End 10411
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCTGTAGTGAAAAA(5' tail) GGCCCGGTGTC(5' stem) GCGAG(loop) GACGCCGGGCC(3' stem) TTTTCTTCGAGGCGG(3' tail). Confidence: 100. opp_overlap 10385

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685