Motif View

Internal ID 17657210
Source Database TransTermHP TERM 1003
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1003
Sequence GCCTCCGAAAGGAGGC
Look for more occurrences
Start 4482561
End 4482576
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTTATAAAACAGAAA(5' tail) GCCTCC(5' stem) TTTC(loop) GGAGGC(3' stem) TTCGGGGGCAACCCC(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685