GEO Dataset

GEO Dataset Dataset details
GDS ID 200005887
GDS Accession GSE5887
Title Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
Summary Pseudomonas aeruginosa PAO1 contacted with and without poplar roots gene expression Poplar contacted with and without PAO1 gene expression. All samples cultured in 1 x hrp + 0.25 % sucrose Keywords: Contact with different species
Expression Profiles 0
Number of Samples 4
GEO Series GSE5887
Reference PMID:21261818
GDS Data Type Expression profiling by array
Taxon Populus sp.; Populus; Pseudomonas aeruginosa

Platforms

Name[Poplar] Affymetrix Poplar Genome Array
Technology Typein situ oligonucleotide
AccessionGPL4359
Name[Pae_G1a] Affymetrix Pseudomonas aeruginosa Array
Technology Typein situ oligonucleotide
AccessionGPL84

GEO Samples

GEO Accession Condition
GSM136936 Poplar in 1 x hrp + 0.25 % sucrose no bacteria
GSM136938 Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose
GSM136934 PAO1 on glasswool 1 x hrp + 0.25 % sucrose 48 hr biofilm cells
GSM136932 PAO1 on poplar root 48 hr