Pseudomonas aeruginosa UCBPP-PA14, PA14_00860 (tagT1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_00860
Name
tagT1
Replicon chromosome
Genomic location 83929 - 84648 (- strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788229.1
GI 116053794
Entrez 4380420
INSDC ABJ15030.1
NCBI Locus Tag PA14_00860
UniParc UPI0000396C0D
UniProtKB Acc Q02V07
UniProtKB ID Q02V07_PSEAB
UniRef100 UniRef100_A0A077JNV2
UniRef50 UniRef50_F6AF48
UniRef90 UniRef90_A6UXK5

Product

Feature Type CDS
Coding Frame 1
Product Name
TagT1
Product Name Confidence: Class 1
CommentHcp Secretion Island-I-encoded type VI secretion system (H1-T6SS)
Evidence for Translation
Charge (pH 7) 5.05
Kyte-Doolittle Hydrophobicity Value -0.101
Molecular Weight (kDa) 26.0
Isoelectric Point (pI) 8.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (430 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_00860
Search term: tagT1
Search term: TagT1

Human Homologs

Ensembl 86, assembly GRCh38.p7
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 1.6e-14
Percent Identity: 31.6

References

RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999