Pseudomonas aeruginosa UCBPP-PA14, PA14_01960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_01960
Name
Replicon chromosome
Genomic location 177315 - 178385 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_788315.1
GI 116053878
Entrez 4383557
INSDC ABJ15114.1
NCBI Locus Tag PA14_01960
UniParc UPI00000C4F6C
UniProtKB Acc Q02US1
UniProtKB ID Q02US1_PSEAB
UniRef100 UniRef100_A0A077JP41
UniRef50 UniRef50_G8PZD9
UniRef90 UniRef90_W0YL24

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux membrane fusion protein
Evidence for Translation
Charge (pH 7) 2.22
Kyte-Doolittle Hydrophobicity Value -0.241
Molecular Weight (kDa) 38.3
Isoelectric Point (pI) 9.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff E-value Percent Identity CARD Version
TriB TriB is a membrane protein that is fused to TriA and both are required for the triclosan efflux pump function of TriABC-OpmH in P. aeruginosa. ARO:3003680 protein homolog model Perfect 0.0 1.0 1.1.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 416 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000155 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_01960

Transposon Insertions in UCBPP-PA14

Type MAR2xT7 transposon (wild type background) insertion site
Mutant ID PA14NR: 33387
Genomic Position 177412
Position in ORF 98(1071)
Reference 16477005

Transposon Insertions in Orthologs

References

No references are associated with this feature.