Pseudomonas aeruginosa UCBPP-PA14, PA14_01970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_01970
Name
Replicon chromosome
Genomic location 178382 - 181429 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_788316.1
GI 116053879
Entrez 4383558
INSDC ABJ15115.1
NCBI Locus Tag PA14_01970
UniParc UPI0000396C69
UniProtKB Acc Q02US0
UniProtKB ID Q02US0_PSEAB
UniRef100 UniRef100_W1MWR2
UniRef50 UniRef50_F6A9K9
UniRef90 UniRef90_W0YJL0

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux transporter
Evidence for Translation
Charge (pH 7) -8.33
Kyte-Doolittle Hydrophobicity Value 0.186
Molecular Weight (kDa) 111.9
Isoelectric Point (pI) 5.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff E-value Percent Identity CARD Version
TriC TriC is a resistance nodulation cell division (RND) transporter that is a part of TriABC-OpmH, a triclosan-specific efflux protein. ARO:3003681 protein homolog model Strict 0.0 0.99803 1.1.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000156 (1046 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_01970

Transposon Insertions in UCBPP-PA14

Type MAR2xT7 transposon (wild type background) insertion site
Mutant ID PA14NR: 25824
Genomic Position 178864
Position in ORF 483(3048)
Reference 16477005

Transposon Insertions in Orthologs

References

No references are associated with this feature.