Pseudomonas aeruginosa UCBPP-PA14, PA14_09240 (pchD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_09240
Name
pchD
Replicon chromosome
Genomic location 782751 - 784394 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788891.1
GI 116052265
Entrez 4385702
INSDC ABJ13501.1
NCBI Locus Tag PA14_09240
UniParc UPI00003962FC
UniProtKB Acc Q02T45
UniProtKB ID Q02T45_PSEAB
UniRef100 UniRef100_Q02T45
UniRef50 UniRef50_O07899
UniRef90 UniRef90_A0A0A8RA39

Product

Feature Type CDS
Coding Frame 1
Product Name
pyochelin biosynthesis protein PchD
Synonyms
Evidence for Translation
Charge (pH 7) -1.34
Kyte-Doolittle Hydrophobicity Value -0.189
Molecular Weight (kDa) 59.8
Isoelectric Point (pI) 6.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7TYB BIOSYNTHETIC PROTEIN 02/11/22 Salicylate Adenylate PchD from Pseudomonas aeruginosa containing salicyl-AMS Pseudomonas aeruginosa PAO1 2.11 X-RAY DIFFRACTION 99.3
7TZ4 BIOSYNTHETIC PROTEIN 02/15/22 Salicylate Adenylate PchD from Pseudomonas aeruginosa containing 4-cyanosalicyl-AMS Pseudomonas aeruginosa 1.69 X-RAY DIFFRACTION 99.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 604 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001481 (356 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_09240
Search term: pchD

Human Homologs

References

No references are associated with this feature.