Pseudomonas aeruginosa UCBPP-PA14, PA14_17890

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_17890
Name
Replicon	chromosome
Genomic location	1536090 - 1537340 (+ strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	YP_789576.1
GI	116051586
Entrez	4381552
INSDC	ABJ12822.1
NCBI Locus Tag	PA14_17890
UniParc	UPI0000396108
UniProtKB Acc	Q02R60
UniProtKB ID	Q02R60_PSEAB
UniRef100	UniRef100_S0I477
UniRef50	UniRef50_G8PYD8
UniRef90	UniRef90_S0J8K0

Product

Feature Type	CDS
Coding Frame	1
Product Name	porin
Synonyms
Evidence for Translation
Charge (pH 7)	0.91
Kyte-Doolittle Hydrophobicity Value	-0.381
Molecular Weight (kDa)	45.7
Isoelectric Point (pI)	7.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
4FSP	TRANSPORT PROTEIN	06/27/12	Crystal Structure of Pseudomonas aeruginosa OccK11 (OpdR)	Pseudomonas aeruginosa	2.323	X-RAY DIFFRACTION	99.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002082 (299 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_17890 Search term: porin

Human Homologs

References