Pseudomonas aeruginosa UCBPP-PA14, PA14_25800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
| Locus Tag |
PA14_25800
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2251906 - 2252544 (+ strand) |
| Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
| Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
Cross-References
| RefSeq | YP_790216.1 |
| GI | 116050959 |
| Entrez | 4384338 |
| INSDC | ABJ12195.1 |
| NCBI Locus Tag | PA14_25800 |
| UniParc | UPI00000C58A7 |
| UniProtKB Acc | Q02PC0 |
| UniProtKB ID | Q02PC0_PSEAB |
| UniRef100 | UniRef100_W0YSW9 |
| UniRef50 | UniRef50_G8Q174 |
| UniRef90 | UniRef90_M4X208 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TetR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.66 |
| Kyte-Doolittle Hydrophobicity Value | -0.553 |
| Molecular Weight (kDa) | 25.0 |
| Isoelectric Point (pI) | 7.24 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7W2O | DNA BINDING PROTEIN | 11/24/21 | Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the wide conformation | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 3.21 | X-RAY DIFFRACTION | 100.0 |
| 7Y0Y | TRANSCRIPTION | 06/06/22 | Crystal structure of Pseudomonas aeruginosa PvrA (SeMet) | Pseudomonas aeruginosa PA14 | 2.09 | X-RAY DIFFRACTION | 100.0 |
| 7XAQ | TRANSCRIPTION | 03/18/22 | Cryo-EM structure of PvrA-DNA complex | Pseudomonas aeruginosa PAO1 | 3.59 | ELECTRON MICROSCOPY | 100.0 |
| 8HJB | TRANSCRIPTION | 11/23/22 | Crystal structure of Pseudomonas aeruginosa PvrA with coenzyme A | Pseudomonas aeruginosa PA14 | 2.65 | X-RAY DIFFRACTION | 100.0 |
| 7Y0Z | TRANSCRIPTION | 06/06/22 | Crystal structure of Pseudomonas aeruginosa PvrA | Pseudomonas aeruginosa PA14 | 2.3 | X-RAY DIFFRACTION | 100.0 |
| 7W2Q | DNA BINDING PROTEIN | 11/24/21 | Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the narrow conformation | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.8 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 273 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002624 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_25800
Search term: TetR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.