Pseudomonas aeruginosa UCBPP-PA14, PA14_66520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_66520
Name
Replicon chromosome
Genomic location 5933103 - 5934032 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_793500.1
GI 116053179
Entrez 4385454
INSDC ABJ14415.1
NCBI Locus Tag PA14_66520
UniParc UPI000045D4F5
UniProtKB Acc Q02EY6
UniProtKB ID Q02EY6_PSEAB
UniRef100 UniRef100_V6AND9
UniRef50 UniRef50_C6WEP6
UniRef90 UniRef90_Q9HUD8

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 14.34
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 34.0
Isoelectric Point (pI) 10.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 557 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004636 (321 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_66520

Human Homologs

Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 13 [Source:HGNC Symbol;Acc:HGNC:19978]
E-value: 6.5e-42
Percent Identity: 39.9
Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 13 [Source:HGNC Symbol;Acc:HGNC:19978]
E-value: 6.5e-42
Percent Identity: 39.9

References

No references are associated with this feature.