Pseudomonas aeruginosa UCBPP-PA14, PA14_69560 (hcpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_69560
Name
hcpB
Replicon chromosome
Genomic location 6206092 - 6206610 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_793741.1
GI 116053416
Entrez 4385051
NCBI Locus Tag PA14_69560

Product

Feature Type CDS
Coding Frame 1
Product Name
secreted protein Hcp
Synonyms
Evidence for Translation
Charge (pH 7) -5.88
Kyte-Doolittle Hydrophobicity Value -0.449
Molecular Weight (kDa) 19.1
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3HE1 structural genomics, unknown function 05/07/09 Secreted protein Hcp3 from Pseudomonas aeruginosa. Pseudomonas aeruginosa 2.098 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000260 (995 members)
Putative Inparalogs 3 predicted inparalogs
secreted protein Hcp (PA14_44890) 100.0% identity
Hcp2 (PA14_43070) 100.0% identity
secreted protein Hcp (PA14_03240) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_69560
Search term: hcpB

Human Homologs

References

No references are associated with this feature.