Pseudomonas aeruginosa UCBPP-PA14, PA14_18480 (algX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_18480
Name
algX
Replicon chromosome
Genomic location 1585123 - 1586547 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_789619.1
GI 116051544
Entrez 4381510
INSDC ABJ12780.1
NCBI Locus Tag PA14_18480
UniParc UPI00000B1C1E
UniProtKB Acc Q02R17
UniProtKB ID Q02R17_PSEAB
UniRef100 UniRef100_W0YWJ7
UniRef50 UniRef50_Q51372
UniRef90 UniRef90_Q51372

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis protein AlgX
Synonyms
Evidence for Translation
Charge (pH 7) 2.02
Kyte-Doolittle Hydrophobicity Value -0.435
Molecular Weight (kDa) 52.5
Isoelectric Point (pI) 7.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4KNC SUGAR BINDING PROTEIN 05/09/13 Structural and functional characterization of Pseudomonas aeruginosa AlgX Pseudomonas aeruginosa 2.141 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 12 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002120 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_18480
Search term: algX

Human Homologs

References

No references are associated with this feature.