Pseudomonas aeruginosa UCBPP-PA14, PA14_18790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_18790
Name
Replicon chromosome
Genomic location 1618641 - 1620116 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789644.1
GI 116051520
Entrez 4381486
INSDC ABJ12756.1
NCBI Locus Tag PA14_18790
UniParc UPI0000E4496D
UniProtKB Acc Q02QZ2
UniProtKB ID Q02QZ2_PSEAB
UniRef100 UniRef100_S0I956
UniRef50 UniRef50_I2BMT2
UniRef90 UniRef90_G3XCL7

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane efflux protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.33
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 52.8
Isoelectric Point (pI) 5.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
opmE opmE is an outer membrane factor protein that is part of the multidrug efflux pump MexPQ-OpmE. [PMID:16301811] ARO:3003700 protein homolog model Strict 916.8 99.39 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 283 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002143 (311 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_18790

Human Homologs

References

No references are associated with this feature.