Pseudomonas aeruginosa UCBPP-PA14, PA14_36300

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_36300
Name
Replicon chromosome
Genomic location 3232682 - 3233266 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 28 transposon mutants in orthologs

Cross-References

RefSeq YP_791054.1
GI 116050129
Entrez 4384797
INSDC ABJ11365.1
NCBI Locus Tag PA14_36300
UniParc UPI0000396A03
UniProtKB Acc Q02LY2
UniProtKB ID Q02LY2_PSEAB
UniRef100 UniRef100_Z2DKD2
UniRef50 UniRef50_A6V5X5
UniRef90 UniRef90_A6V5X5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.20
Kyte-Doolittle Hydrophobicity Value -0.296
Molecular Weight (kDa) 21.8
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4L62 TRANSCRIPTION/DNA 06/11/13 Crystal Structure of Pseudomonas aeruginosa transcriptional regulator PA2196 bound to its operator DNA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.9 X-RAY DIFFRACTION 99.5
3RD3 TRANSCRIPTION 03/31/11 Structure of Pseudomonas aeruginosa transcriptional regulator PA2196 Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 99.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 293 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_36300

Human Homologs

References

No references are associated with this feature.