Pseudomonas aeruginosa UCBPP-PA14, PA14_37850 (sppC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_37850
Name
sppC
Replicon chromosome
Genomic location 3376480 - 3377496 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_791178.1
GI 116050009
Entrez 4382350
NCBI Locus Tag PA14_37850

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease, SppC
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) 6.62
Kyte-Doolittle Hydrophobicity Value 0.487
Molecular Weight (kDa) 37.4
Isoelectric Point (pI) 9.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003389 (295 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_37850
Search term: sppC

Transposon Insertions in UCBPP-PA14

Type MAR2xT7 transposon (wild type background) insertion site
Mutant ID PA14NR: 37705
Genomic Position 3377173
Position in ORF 694(1017)
Reference 16477005

Transposon Insertions in Orthologs

References

Swarming motility is modulated by expression of the putative xenosiderophore transporter SppR-SppABCD in Pseudomonas aeruginosa PA14.
Pletzer D, Braun Y, Weingart H
Antonie Van Leeuwenhoek 2016 Jun;109(6):737-53
PubMed ID: 26995781