Pseudomonas aeruginosa UCBPP-PA14, PA14_46480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_46480
Name
Replicon chromosome
Genomic location 4136496 - 4137002 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 5 transposon mutants in orthologs

Cross-References

RefSeq YP_791865.1
GI 116049332
Entrez 4382297
INSDC ABJ10568.1
NCBI Locus Tag PA14_46480
UniParc UPI00003966E9
UniProtKB Acc Q02JM1
UniProtKB ID Q02JM1_PSEAB
UniRef100 UniRef100_S0IKA9
UniRef50 UniRef50_Q4LBL9
UniRef90 UniRef90_W0YM26

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.17
Kyte-Doolittle Hydrophobicity Value -0.432
Molecular Weight (kDa) 19.2
Isoelectric Point (pI) 9.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4GCV TRANSCRIPTION 07/31/12 Structure of a Putative transcription factor (PA1374)from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.3 X-RAY DIFFRACTION 98.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 369 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000114 (1395 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_46480

Human Homologs

References

No references are associated with this feature.