Motif View

Internal ID 17655636
Source Database TransTermHP TERM 59
Feature Type terminator
Name
Rho-independent transcription terminator TERM 59
Sequence GCGCCGGGCGGCGCCCGGCGC
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Start 323568
End 323588
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAATGAACCCACC(5' tail) GCGCCGGGC(5' stem) GGC(loop) GCCCGGCGC(3' stem) TTTCTTCCCGCCACA(3' tail). Confidence: 100. opp_overlap 323562 323566 323563

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685