Motif View

Internal ID 17655640
Source Database TransTermHP TERM 64
Feature Type terminator
Name
Rho-independent transcription terminator TERM 64
Sequence CTGACCGGGGGCGGCCGGCGTGGTCCGCCGCTCCCGGACAG
Look for more occurrences
Start 336888
End 336928
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTTTCCGTTTGATC(5' tail) CTGACCGGGGGCGGCCGGC(5' stem) GTG(loop) GTCCGCCGCTCCCGGACAG(3' stem) TCTTGAATAGAAGAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685