Motif View

Internal ID 17655644
Source Database TransTermHP TERM 71
Feature Type terminator
Name
Rho-independent transcription terminator TERM 71
Sequence GGAGGCCGCTGGGCCTCC
Look for more occurrences
Start 355206
End 355223
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGGAAACGAAAAAA(5' tail) GGAGGCC(5' stem) GCTG(loop) GGCCTCC(3' stem) TTTTCCTTTCCGCCG(3' tail). Confidence: 100. opp_overlap 355206 355192, overlap 355201

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685