Motif View

Internal ID 17655647
Source Database TransTermHP TERM 75
Feature Type terminator
Name
Rho-independent transcription terminator TERM 75
Sequence GCGGCGCAGCCGAAGGCGGCCTGAGCCGC
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Start 384504
End 384532
Strand +
Genomic Context Located within gene lgt
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCTACCGCCGCGAC(5' tail) GCGGCGCA-GCCG(5' stem) AAGG(loop) CGGCCTGAGCCGC(3' stem) TTTTCGTGCCCGGGG(3' tail). Confidence: 91. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685