Motif View

Internal ID 17655674
Source Database TransTermHP TERM 123
Feature Type terminator
Name
Rho-independent transcription terminator TERM 123
Sequence GCCCGAGGCACAGGCCTCGGGC
Look for more occurrences
Start 595217
End 595238
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGACCGATGAAAAAA(5' tail) GCCCGAGGC(5' stem) ACAG(loop) GCCTCGGGC(3' stem) TTTTCGTCACCAGCG(3' tail). Confidence: 100. opp_overlap 595217

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685