Motif View

Internal ID 17655677
Source Database TransTermHP TERM 129
Feature Type terminator
Name
Rho-independent transcription terminator TERM 129
Sequence GCCCCGCCGAAGCGGGGC
Look for more occurrences
Start 603670
End 603687
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGAAACGAAAAA(5' tail) GCCCCGC(5' stem) CGAA(loop) GCGGGGC(3' stem) TTTTTATCGCGCGGT(3' tail). Confidence: 100. opp_overlap 603670 603664

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685