Motif View

Internal ID 17655813
Source Database TransTermHP TERM 341
Feature Type terminator
Name
Rho-independent transcription terminator TERM 341
Sequence GGGCGCGGTCCGCCGCCGGGCCGCGCCG
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Start 1368305
End 1368332
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGACGGGGGGAAA(5' tail) CGGCGCGGCCCG(5' stem) GCGG(loop) CGGACCGCGCCC(3' stem) TCGGCTTCAGCGGTA(3' tail). Confidence: 91. overlap 1368306

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685