Motif View

Internal ID 17655857
Source Database TransTermHP TERM 404
Feature Type terminator
Name
Rho-independent transcription terminator TERM 404
Sequence GGCCGCCTCCGGGCGGCC
Look for more occurrences
Start 1733881
End 1733898
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGAACCCCAGGAA(5' tail) GGCCGCC(5' stem) TCCG(loop) GGCGGCC(3' stem) TTTTTCATGAGCCGA(3' tail). Confidence: 100. opp_overlap 1733881

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685