Motif View

Internal ID 17656041
Source Database TransTermHP TERM 693
Feature Type terminator
Name
Rho-independent transcription terminator TERM 693
Sequence GAAAAAGCCCGGCATTCGCCGGGCTTTTTC
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Start 3204468
End 3204497
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGGACAGCGGAAAC(5' tail) GAAAAAGCCCGGC(5' stem) GAAT(loop) GCCGGGCTTTTTC(3' stem) TCGTCGCGCGAAAGG(3' tail). Confidence: 91. opp_overlap 3204474, overlap 3204467 3204474

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685