Motif View

Internal ID 17656044
Source Database TransTermHP TERM 697
Feature Type terminator
Name
Rho-independent transcription terminator TERM 697
Sequence CCGGTCCCTCGGGGCCGG
Look for more occurrences
Start 3207190
End 3207207
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGACCTGTTGAAAA(5' tail) CCGGTCC(5' stem) CTCG(loop) GGGCCGG(3' stem) TTTTTTTATGCCTGC(3' tail). Confidence: 100. opp_overlap 3207190, overlap 3207202

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685