Motif View

Internal ID 17656045
Source Database TransTermHP TERM 698
Feature Type terminator
Name
Rho-independent transcription terminator TERM 698
Sequence CCCGCGTACCCGCAAGGGACGCGGG
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Start 3207244
End 3207268
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGGCATGAAAAAA(5' tail) CCCGCGT-CCC(5' stem) TTGC(loop) GGGTACGCGGG(3' stem) CCTCTGCCTCGACGC(3' tail). Confidence: 100. gap 1, opp_overlap 3207202

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685