Motif View

Internal ID 17656059
Source Database TransTermHP TERM 721
Feature Type terminator
Name
Rho-independent transcription terminator TERM 721
Sequence GCCGCACAGCCTGTAAGGGCGTGCGGC
Look for more occurrences
Start 3324891
End 3324917
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGCGCTAAAGAAAA(5' tail) GCCGCAC-GCCC(5' stem) TTAC(loop) AGGCTGTGCGGC(3' stem) TTTTCCACGTCGGAA(3' tail). Confidence: 100. gap 1, opp_overlap 3324891, overlap 3324886

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685