Motif View

Internal ID 17656071
Source Database TransTermHP TERM 734
Feature Type terminator
Name
Rho-independent transcription terminator TERM 734
Sequence GCCGCCTCGAAGGCGGC
Look for more occurrences
Start 3343730
End 3343746
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGACATGAAAAA(5' tail) GCCGCCT(5' stem) CGA(loop) AGGCGGC(3' stem) TTTTTCGTGGGCCTT(3' tail). Confidence: 100. opp_overlap 3343730, overlap 3343718 3343718

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685