Motif View

Internal ID 17656083
Source Database TransTermHP TERM 754
Feature Type terminator
Name
Rho-independent transcription terminator TERM 754
Sequence GACCCCGTCGACTCGAACGAGCGACGGGGTC
Look for more occurrences
Start 3395065
End 3395095
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACAGGTTTTCCTGGA(5' tail) GACCCCGTCGACTC(5' stem) GAAC(loop) GAG-CGACGGGGTC(3' stem) TTTGCTTTTTCGCCC(3' tail). Confidence: 100. gap 1, overlap 3395060

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685