Motif View

Internal ID 17656149
Source Database TransTermHP TERM 850
Feature Type terminator
Name
Rho-independent transcription terminator TERM 850
Sequence GGGATGGCGGCAAGCCGCCATCCC
Look for more occurrences
Start 3773392
End 3773415
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGTTCGGAAGGGAC(5' tail) GGGATGGCGG(5' stem) CAAG(loop) CCGCCATCCC(3' stem) TTTCCGACTTCCTGC(3' tail). Confidence: 100. opp_overlap 3773391

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685