Motif View

Internal ID 17656194
Source Database TransTermHP TERM 924
Feature Type terminator
Name
Rho-independent transcription terminator TERM 924
Sequence GAAAGCCGACCCGAGGGTCGGCTTTC
Look for more occurrences
Start 4067566
End 4067591
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCCTGCAACGACAA(5' tail) GAAAGCCGACC(5' stem) CGAG(loop) GGTCGGCTTTC(3' stem) TTGTGCCAGGGTTCA(3' tail). Confidence: 93. opp_overlap 4067563 4067566 4067570, overlap 4067570

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685