Motif View

Internal ID 17656196
Source Database TransTermHP TERM 926
Feature Type terminator
Name
Rho-independent transcription terminator TERM 926
Sequence GCCGACCCGAGGGTCGGC
Look for more occurrences
Start 4067570
End 4067587
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAACGACAAGAAA(5' tail) GCCGACC(5' stem) CGAG(loop) GGTCGGC(3' stem) TTTCTTGTGCCAGGG(3' tail). Confidence: 95. opp_overlap 4067570 4067566 4067563, overlap 4067566

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685