Motif View

Internal ID 17656198
Source Database TransTermHP TERM 929
Feature Type terminator
Name
Rho-independent transcription terminator TERM 929
Sequence GGGGTGGCAAGAGCCACCCC
Look for more occurrences
Start 4068637
End 4068656
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCTTGAGAAGAAAA(5' tail) GGGGTGGC(5' stem) TCTT(loop) GCCACCCC(3' stem) TTCACCGTACCAGAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685