Motif View

Internal ID 17656296
Source Database TransTermHP TERM 1112
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1112
Sequence GCCCGCCACGCTTGTCGTGGCGGGC
Look for more occurrences
Start 4884678
End 4884702
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCAGCCAGGAAGA(5' tail) GCCCGCCACG(5' stem) CTTGT(loop) CGTGGCGGGC(3' stem) TCTGTGCTTTGCCCG(3' tail). Confidence: 91. opp_overlap 4884676, overlap 4884676 4884672

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685