| Internal ID | 17656399 | Source Database | TransTermHP TERM 1250 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1250
|
| Sequence |
TGAAATCGCCCGAACGCTGGTCGCAAGCGTTCGGGCGCATTGTTA Look for more occurrences |
| Start | 5239405 |
| End | 5239449 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTCCGGCGGGGCCTT(5' tail) TGA-AAT-CGCCCGAACGCTGG(5' stem) TCG(loop) CAAGCGTTCGGGCGCATTGTTA(3' stem) TTTTTGGAGATACAC(3' tail). Confidence: 100. gap 2, opp_overlap 5239410 5239411, overlap 5239407 5239410 5239410 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|