Motif View

Internal ID 17656404
Source Database TransTermHP TERM 1255
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1255
Sequence GCCCCGGCCAAGTGCCGGGGC
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Start 5241869
End 5241889
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCGTCCCAGGAAA(5' tail) GCCCCGGC(5' stem) CAAGT(loop) GCCGGGGC(3' stem) TTTTTCGTTCCCGTC(3' tail). Confidence: 100. opp_overlap 5241869

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685